목록전체 글 (63)
bioinfo-statistics
Perplexity의 추천 1~10 : 유전체 & 전사체 AI 모델Evo2: 100,000종 DNA 기반, 돌연변이 예측 및 유전체 설계.DNABERT-2: DNA 서열 해석에 특화된 BERT 기반 AI.Nucleotide Transformer: 대규모 유전체 데이터 학습용 Transformer 기반 모델.GeneFormer: 유전자 기능 및 표현 해석을 위한 전사체 모델.scFoundation: 단일 세포 데이터 분석용 파운데이션 모델.scGPT: 단일 세포 transcriptome 분석용 GPT 모델.RNA-FM: RNA 시퀀스 기능 및 구조 예측 AI(비공개).RNABERT: RNA 구조/기능 예측에 특화된 BERT 모델.GENA-LM: 인간 DNA를 BPE 토큰화로 처리하는 랭귀지 ..
AbstractRNA-protein interactions critically regulate gene expression and cellular processes, yet their comprehensive mapping remains challenging due to their structural diversity. We introduce PRIM-seq (protein-RNA interaction mapping by sequencing), a method for concurrent de novo identification of RNA-binding proteins and their associated RNAs. PRIM-seq generates unique chimeric DNA sequences ..
THE PAPER IN BRIEF• Cancer is a dynamic condition but tracking its evolution using genomic analyses of single tumour samples is challenging.• Certain sites in the genome are epigenetically modified with a methyl group, and some of these sites stochastically fluctuate between a methylated and an unmethylated state over time.• The methylation pattern of these sites in a population of cancer cells ..